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  • 2017

    Antidote application: An educational system for treatment of common toxin overdose

    Long, J. B., Chitkushev, L., Zhang, Y., Zhang, G. & Brusic, V., Aug 20 2017, ACM-BCB 2017 - Proceedings of the 8th ACM International Conference on Bioinformatics, Computational Biology, and Health Informatics. Association for Computing Machinery, Inc, p. 442-448 7 p. (ACM-BCB 2017 - Proceedings of the 8th ACM International Conference on Bioinformatics, Computational Biology, and Health Informatics).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    2 Citations (Scopus)
  • MCVdb: A database for knowledge discovery in Merkel cell polyomavirus with applications in T cell immunology and vaccinology

    Zhang, G. L., DeCaprio, J. A., Chitkushev, L., Keskin, D. B., Wu, C. J. & Brusic, V., Dec 15 2017, Proceedings - 2017 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2017. Yoo, I., Zheng, J. H., Gong, Y., Hu, X. T., Shyu, C-R., Bromberg, Y., Gao, J. & Korkin, D. (eds.). Institute of Electrical and Electronics Engineers Inc., p. 1483-1488 6 p. (Proceedings - 2017 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2017; vol. 2017-January).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  • 2016

    Zinc; HIF-1 Mimetic in Human Renal Proximal Tubular Cells

    Ryoichi, B., Takiyama, Y., Manami, M., Atageldiyeva, K., Fujita, Y. & Haneda, M., Jun 1 2016, Zinc; HIF-1 Mimetic in Human Renal Proximal Tubular Cells. American Diabetes Association Inc., p. A137-A137

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  • 2015

    A New Player in Diabetic Nephropathy: Metallothionein 3 Is a Target for Hypoxia Inducible Factor-1

    Takiyama, Y., Manami, M., Atageldiyeva, K., Yanagimachi, T., Honjo, J., Fujita, Y., Abiko, A. & Haneda, M., Jun 1 2015, A New Player in Diabetic Nephropathy: Metallothionein 3 Is a Target for Hypoxia Inducible Factor-1. American Diabetes Association Inc., p. A142-A142

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  • High glucose induces membrane-bound transcription factor peptidase site1 via carbohydrate response element binding protein to modulate ER stress in mesangial cells

    Makino, Y., Atageldiyeva, K., Kitsunai, H., Mizumoto, K., Yanagimachi, T., Fujita, Y., Abiko, A., Takiyama, Y. & Haneda, M., Sep 1 2015, High glucose induces membrane-bound transcription factor peptidase site1 via carbohydrate response element binding protein to modulate ER stress in mesangial cells. Springer Verlag, p. S538-S538

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  • Low carbohydrate diet and SGLT-2 inhibitors dissimilarly influenced on body weight and adiposity in normal mice

    Atageldiyeva, K., Fujita, Y., Yanagimachi, T., Honjo, J., Abiko, A., Takiyama, Y., Makino, Y. & Haneda, M., Sep 1 2015, Low carbohydrate diet and SGLT-2 inhibitors dissimilarly influenced on body weight and adiposity in normal mice. Springer Verlag, Vol. 58. p. S365-S366

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  • 2014

    Antidote application: An educational system for treatment of common toxin overdose

    Long, J., Brusic, V., Zhang, Y., Zhang, G. L. & Chitkushev, L., Sep 20 2014, ACM BCB 2014 - 5th ACM Conference on Bioinformatics, Computational Biology, and Health Informatics. Association for Computing Machinery, Inc, p. 598-599 2 p. (ACM BCB 2014 - 5th ACM Conference on Bioinformatics, Computational Biology, and Health Informatics).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  • SGLT2 Inhibitor Luseogliflozin (TS-071) Protects from Diabetic Nephropathy in an Animal Model of Type 2 Diabetes.

    Takiyama, Y., R, B., Manami, M., Atageldiyeva, K., Yanagimachi, T., Honjo, J., Fujita, Y., Abiko, A., Makino, Y. & Haneda, M., Jun 2014, SGLT2 Inhibitor Luseogliflozin (TS-071) Protects from Diabetic Nephropathy in an Animal Model of Type 2 Diabetes.. American Diabetes Association Inc., p. A136-A136

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  • Zinc exerts anti-fibrotic action by inhibiting TGF-beta1-induced type I collagen and fibronectin in human renal proximal tubular cells

    Takiyama, Y., Manami, M., Atageldiyeva, K., Yanagimachi, T., Honjo, J., Fujita, Y., Makino, Y. & Haneda, M., Sep 1 2014, Zinc exerts anti-fibrotic action by inhibiting TGF-beta1-induced type I collagen and fibronectin in human renal proximal tubular cells. Springer Verlag

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  • 2013

    Biomarkers in immunology: From concepts to applications

    Zhang, P., Chitkushev, L., Brusic, V. & Zhang, G. L., 2013, 2013 ACM Conference on Bioinformatics, Computational Biology and Biomedical Informatics, ACM-BCB 2013. p. 826-835 10 p. (2013 ACM Conference on Bioinformatics, Computational Biology and Biomedical Informatics, ACM-BCB 2013).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  • HPVdb: A Data mining system for knowledge discovery in human papillomavirus with applications in T cell immunology and vaccinology

    Zhang, G. L., Riemer, A., Keskin, D. B., Chitkushev, L., Reinherz, E. L. & Brusic, V., 2013, 2013 ACM Conference on Bioinformatics, Computational Biology and Biomedical Informatics, ACM-BCB 2013. p. 843-848 6 p. (2013 ACM Conference on Bioinformatics, Computational Biology and Biomedical Informatics, ACM-BCB 2013).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  • Landscape of neutralizing assessment of monoclonal antibodies against dengue virus

    Sun, J., Zhang, G. L., Olsen, L. R., Reinherz, E. L. & Brusic, V., 2013, 2013 ACM Conference on Bioinformatics, Computational Biology and Biomedical Informatics, ACM-BCB 2013. p. 836-842 7 p. (2013 ACM Conference on Bioinformatics, Computational Biology and Biomedical Informatics, ACM-BCB 2013).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    2 Citations (Scopus)
  • 2011

    A cDNA microarray for rapid and economical identification of HLA profiles of individuals

    Zhang, G. L., Reinherz, E. L., Keskin, D. B. & Brusic, V., Dec 1 2011, 2011 IEEE International Conference on Bioinformatics and Biomedicine Workshops, BIBMW 2011. p. 677-679 3 p. 6112451. (2011 IEEE International Conference on Bioinformatics and Biomedicine Workshops, BIBMW 2011).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    2 Citations (Scopus)
  • PRED mafa: A system for prediction of peptide binding to several MHC class i molecules in cynomolgus macaques

    Zhang, G. L., O'Connor, D. H., Budde, M. L., Hildebrand, W. H., Lhost, J. J. & Brusic, V., Dec 1 2011, 2011 ACM Conference on Bioinformatics, Computational Biology and Biomedicine, BCB 2011. p. 602-606 5 p. (2011 ACM Conference on Bioinformatics, Computational Biology and Biomedicine, BCB 2011).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  • Probe design optimization of HLA microarray - Data cleaning of probe signals from cDNA tiling microarray: Outlier detection, noise reduction, and identification of uninformative probes in HLA typing application

    Dilek, E., Zlateva, T., Zhang, G. L., Chitkushev, L., Lee, J. Y. & Brusic, V., Dec 1 2011, 2011 IEEE International Conference on Bioinformatics and Biomedicine Workshops, BIBMW 2011. p. 680-682 3 p. 6112452. (2011 IEEE International Conference on Bioinformatics and Biomedicine Workshops, BIBMW 2011).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  • Visualization tools for presenting and analysis of global landscapes of vaccine targets

    Kalathur, S., Brusic, V., Zhang, G. L., Chitkushev, L. & Zlateva, T., Dec 1 2011, 2011 IEEE International Conference on Bioinformatics and Biomedicine Workshops, BIBMW 2011. p. 683-688 6 p. 6112453. (2011 IEEE International Conference on Bioinformatics and Biomedicine Workshops, BIBMW 2011).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  • 2010

    The ImmunoGrid simulator: How to use it

    Pappalardo, F., Halling-Brown, M., Pennisi, M., Chiacchio, F., Sansom, C. E., Shepherd, A. J., Moss, D. S., Motta, S. & Brusic, V., 2010, Computational Intelligence Methods for Bioinformatics and Biostatistics - 6th International Meeting, CIBB 2009, Revised Selected Papers. p. 1-19 19 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 6160 LNBI).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  • 2006

    BioDArt - Catalogue of biological data artifact examples

    Veeramani, A., Gopalakrishnan, K., Brusic, V. & Koh, J. L. Y., Dec 1 2006, ICBPE 2006 - Proceedings of the 2006 International Conference on Biomedical and Pharmaceutical Engineering. p. 324-329 6 p. 4155917. (ICBPE 2006 - Proceedings of the 2006 International Conference on Biomedical and Pharmaceutical Engineering).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    2 Citations (Scopus)
  • Computational models for identifying promiscuous HLA-B7 binders based on information theory and support vector machine

    Zhang, G. L., Tong, J. C., Zhang, Z. H., Zheng, Y., August, J. T., Kwoh, C. K. & Brusic, V., Dec 1 2006, ICBPE 2006 - Proceedings of the 2006 International Conference on Biomedical and Pharmaceutical Engineering. p. 319-323 5 p. 4155916. (ICBPE 2006 - Proceedings of the 2006 International Conference on Biomedical and Pharmaceutical Engineering).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  • Extreme learning machine for predicting HLA-peplide binding

    Handoko, S. D., Keong, K. C., Soon, O. Y., Zhang, G. L. & Brusic, V., Jan 1 2006, Advances in Neural Networks - ISNN 2006: Third International Symposium on Neural Networks, ISNN 2006, Proceedings - Part III. Springer Verlag, p. 716-721 6 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 3973 LNCS).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    19 Citations (Scopus)
  • Functional prediction of snake neurotoxins

    Seah, S. H., Kwoh, C. K., Brusic, V., Sakharkar, M. K. & Ng, G. S., Dec 1 2006, 9th International Conference on Control, Automation, Robotics and Vision, 2006, ICARCV '06. 4150399. (9th International Conference on Control, Automation, Robotics and Vision, 2006, ICARCV '06).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  • Incremental maintenance of biological databases using association rule mining

    Lam, K. T., Koh, J. L. Y., Veeravalli, B. & Brusic, V., 2006, Pattern Recognition in Bioinformatics - International Workshop, PRIB 2006, Proceedings. Springer Verlag, p. 140-150 11 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 4146 LNBI).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    Open Access
    1 Citation (Scopus)
  • Multi-objective evolutionary algorithm for discovering peptide binding motifs

    Rajapakse, M., Schmidt, B. & Brusic, V., Jul 14 2006, Applications of Evolutionary Computing - EvoWorkshops 2006: EvoBIO, EvoCOMNET, EvoHOT, EvoIASP, EvoINTERACTION, EvoMUSART, and EvoSTOC, Proceedings. p. 149-158 10 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 3907 LNCS).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    7 Citations (Scopus)
  • Performance evaluation of MULTIEPD1 on prediction of MHC class i binders

    Zhang, G. L., Kwoh, C. K., August, J. T. & Brusic, V., Dec 1 2006, ICBPE 2006 - Proceedings of the 2006 International Conference on Biomedical and Pharmaceutical Engineering. p. 307-313 7 p. 4155914. (ICBPE 2006 - Proceedings of the 2006 International Conference on Biomedical and Pharmaceutical Engineering).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    2 Citations (Scopus)
  • Temporal and antigenic analysis of dengue virus serotype 1 genome polyprotein sequences

    Rajapakse, M., Veeramani, A., Gopalakrishnan, K., Ananthanarayan, S., Khan, A. M., Srinivasan, K. N., August, J. T. & Brusic, V., Dec 1 2006, ICBPE 2006 - Proceedings of the 2006 International Conference on Biomedical and Pharmaceutical Engineering. p. 301-306 6 p. 4155913. (ICBPE 2006 - Proceedings of the 2006 International Conference on Biomedical and Pharmaceutical Engineering).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution