Laboratory of bioinformatics and systems biology

2021

Whole-genome sequencing data of Kazakh individuals

Kairov, U., Molkenov, A., Rakhimova, S., Kozhamkulov, U., Sharip, A., Karabayev, D., Daniyarov, A., H.Lee, J., D.Terwilliger, J., Akilzhanova, A. & Zhumadilov, Z., Dec 2021, In: BMC Research Notes. 14, 1, 45.

Research output: Contribution to journal › Article › peer-review

Open Access

2 Citations (Scopus)

2020

Clinical Utility of Using Next Generation Sequencing in Life Threatening Ventricular Arrhythmia

Akilzhanova, A., Guelly, C., Abilova, Z., Rakhimova, S., Akhmetova, A., Kairov, U., Kozhamkulov, U., Nuralinov, O., Abdrakhmanov, A., Akilzhanova, S., Trajanoski, S., Bekbosynova, M. & Zhumadilov, Z., Apr 2020, In: Journal of Heart and Lung Transplantation. 39, 4S, p. S360

Research output: Contribution to journal › Article › peer-review

Draft Genome Sequence of Lactobacillus salivarius KZ-NCB, Isolated from Chicken Cecum

Kirillov, S., Daniyarov, A., Turgimbayeva, A., Ramankulov, Y., Kalendar, R. & Abeldenov, S., Dec 10 2020, In: Microbiology Resource Announcements. 9, e01129-20.

Research output: Contribution to journal › Article › peer-review

Open Access

File

21 Downloads (Pure)

Geographical and temporal distribution of SARS-CoV-2 clades in the WHO European Region, January to June 2020

Alm, E., Broberg, E. K., Connor, T., Hodcroft, E. B., Komissarov, A. B., Maurer-Stroh, S., Melidou, A., Neher, R. A., O'Toole, Á., Pereyaslov, D., The WHO European Region sequencing laboratories and GISAID EpiCoV group & Kalendar, R., Aug 13 2020, In: Eurosurveillance. 25, 32, 2001410.

Research output: Contribution to journal › Article › peer-review

Open Access

157 Citations (Scopus)

In Silico Estimation of the Abundance and Phylogenetic Significance of the Composite Oct4-Sox2 Binding Motifs within a Wide Range of Species

Kulyyassov, A. & Kalendar, R., Nov 27 2020, In: Data. 5, 4, 111.

Research output: Contribution to journal › Article › peer-review

Open Access

2 Citations (Scopus)

Long tandem arrays of cassandra retroelements and their role in genome dynamics in plants

Kalendar, R., Raskina, O., Belyayev, A. & Schulman, A. H., Apr 2 2020, In: International journal of molecular sciences. 21, 8, 2931.

Research output: Contribution to journal › Article › peer-review

Open Access

26 Citations (Scopus)

Molecular Genetic Identification of Scots Pine and Siberian Larch Populations in Perm Krai Based on Polymorphism of ISSR-PCR Markers

Translated title of the contribution: Molecular Genetic Identification of Scots Pine and Siberian Larch Populations in Perm Krai Based on Polymorphism of ISSR-PCR MarkersSboeva, Y., Vasil’eva, Y., Chertov, N., Pystogova, N., Boronnikova, S., Kalendar, R. & Martynenko, N., Oct 1 2020, In: Сибирский лесной журнал. 4, p. 35-44

Research output: Contribution to journal › Article › peer-review

Open Access

Whole genome sequence data of Mycobacterium tuberculosis XDR strain, isolated from patient in Kazakhstan

Daniyarov, A., Molkenov, A., Rakhimova, S., Akhmetova, A., Nurkina, Z., Yerezhepov, D., Chingissova, L., Bismilda, V., Toxanbaeva, B., Akilzhanova, A., Kozhamkulov, U. & Kairov, U., Dec 2020, In: Data in Brief. 33, 106416.

Research output: Contribution to journal › Article › peer-review

Open Access

5 Citations (Scopus)

Выделение и PBS-дифференциация изолятов Alternaria spp. Isolation and PBS differentiation of isolates Alternaria spp.

Khapilina, O., Raizer, O., Turzhanova, A. & Kalendar, R., Dec 1 2020, In: Agrarian Bulletin of the Urals. 10, 64-72

Research output: Contribution to journal › Article › peer-review

Open Access

File

24 Downloads (Pure)

Молекулярно-генетическая идентификация популяций Pinus sylvestris L. и Larix sibirica Ledeb. в Пермском крае с использованием SNP-маркеров

Translated title of the contribution: Molecular Genetic Identification of Populations of Pinus sylvestris L. and Larix sibirica Ledeb. in Perm Krai Using SNP-markersChertov, N., Pystogova, N., Malyshkina, E., Nechaeva, Y., Boronnikova, S. & Kalendar, R., Dec 16 2020, In: Bulletin of Science and Practice. 6, 12, p. 14-22

Research output: Contribution to journal › Article › peer-review

Open Access

Полиморфизм генов ферментов антиоксидантной системы у культурных видов пшеницы и дикорастущих сородичей: Polymorphism of genes of antioxidant system enzymes in cultivated wheat species and wild-growing relatives

Raizer, O., Khapilina, O., Turzhanova, A., Tagimanova, D. S. & Kalendar, R., Dec 1 2020, In: Agrarian Bulletin of the Urals. 11, 85-92

Research output: Contribution to journal › Article › peer-review

Open Access

File

35 Downloads (Pure)

2019

Assessing reproducibility of matrix factorization methods in independent transcriptomes

Cantini, L., Kairov, U., De Reyniès, A., Barillot, E., Radvanyi, F. & Zinovyev, A., Nov 1 2019, In: Bioinformatics. 35, 21, p. 4307-4313 7 p.

Research output: Contribution to journal › Article › peer-review

Open Access

15 Citations (Scopus)

Impact of electromagnetic fields on in vitro toxicity of silver and graphene nanoparticles

Saliev, T., Baiskhanova, D. M., Akhmetova, A., Begimbetova, D., Akishev, M., Kulsharova, G., Molkenov, A., Nurgozhin, T., Alekseyeva, T. & Mikhalovsky, S., Jan 2 2019, In: Electromagnetic Biology and Medicine. 38, 1, p. 21-31 11 p.

Research output: Contribution to journal › Article › peer-review

11 Citations (Scopus)

2018

Genetic Epidemiologyof Ventricular Tachycardia in Patients with Cardiomyopathy in Kazakhstan: ATargeted Sequencing Study

Bekbossynova, M., Akilzhanova, A., Guelly, C., Abilova, Z., Akhmetova, A., Kairov, U., Nuralinov, O., Rashbayeva, G., Trajanoski, S., Abdirova, B. & Zhumadilov, Z., Apr 1 2018, In: Journal of Heart and Lung Transplantation. 37, 4, p. S322

Research output: Contribution to journal › Article › peer-review

Stabilized Independent Component Analysis outperforms other methods in finding reproducible signals in tumoral transcriptomes

Kairov, U., 2018, In: bioRxiv.

Research output: Contribution to journal › Article

2016

Induction of apoptosis in U937 cells by using a combination of bortezomib and low-intensity ultrasound

Saliev, T., Feril, L. B., Ogawa, K., Watanabe, A., Begimbetova, D., Molkenov, A., Alimbetov, D. & Tachibana, K., Dec 22 2016, In: Medical Science Monitor. 22, p. 5049-5057 9 p.

Research output: Contribution to journal › Article › peer-review

Open Access

1 Citation (Scopus)

2015

Draft genome sequences of two clinical isolates of Mycobacterium tuberculosis from sputum of Kazakh patients

Kairov, U., Kozhamkulov, U., Molkenov, A., Rakhimova, S., Askapuli, A., Zhabagin, M., Akhmetova, A., Yerezhepov, D., Abilova, Z., Abilmazhinova, A., Bismilda, V., Chingisova, L., Zhumadilov, Z. & Akilzhanova, A., 2015, In: Genome Announcements. 3, 3, e00466-15.

Research output: Contribution to journal › Article › peer-review

5 Citations (Scopus)

2014

Cancer-related genes in the transcription signature of facioscapulohumeral dystrophy myoblasts and myotubes

Dmitriev, P., Kairov, U., Robert, T., Barat, A., Lazar, V., Carnac, G., Laoudj-Chenivesse, D. & Vassetzky, Y. S., Feb 2014, In: Journal of Cellular and Molecular Medicine. 18, 2, p. 208-217 10 p.

Research output: Contribution to journal › Article › peer-review

Open Access

9 Citations (Scopus)

2013

Vitamin D Receptor Gene Polymorphisms in Susceptibility to Tuberculosis in the Kazakh Population in Almaty and Almaty Area

Zhabagin, M., Abilova, Z., Askapuli, A., Rakhimova, S., Kairov, U., Berikkhanova, K., Terlikbayeva, A., Darisheva, M., Alenova, A. & Akilzhanova, A., 2013, In: Central Asian journal of global health. 2, Suppl, p. 102

Research output: Contribution to journal › Article › peer-review

2012

Network analysis of gene lists for finding reproducible prognostic breast cancer gene signatures

Kairov, U., Karpenyuk, T., Ramanculov, E. & Zinovyev, A., 2012, In: Bioinformation. 8, 16, p. 773-6 4 p.

Research output: Contribution to journal › Article › peer-review

2006

IRAP and REMAP analyses of barley varieties of Odessa breeding

Brik, A. F., Kalendar, R. N., Stratula, O. R. & Sivolap, Y. M., 2006, In: Cytology and Genetics. 40, 3, p. 24-33 10 p.

Research output: Contribution to journal › Article › peer-review

4 Citations (Scopus)

1997

Marker analysis of some barley QTL with the help of RAPD and isoenzymes

Sivolap, Y. M., Kalendar', R. N., Netsvetaev, V. P. & Chaplya, A. E., 1997, In: Tsitologiya i Genetika. 31, 4, p. 39-45 7 p.

Research output: Contribution to journal › Article › peer-review

2 Citations (Scopus)

1995

Geneticheskii polimorfizm iachmenia, vyiavlennyi PTsR s proizvol'nymi praimerami.

Translated title of the contribution: Genetic polymorphism in barley detected by arbitrary primersSivolap, I. M. & Kalendar', R. N., Oct 1995, In: Genetika. 31, 10, p. 1358-1364 7 p.

Research output: Contribution to journal › Article › peer-review

10 Citations (Scopus)

1994

Geneticheskiǐ polimorfizm zlakovykh rasteniǐ pri pomoshchi PTsR s proizvol'nymi praǐmerami.

Translated title of the contribution: The genetic polymorphism of cereals demonstrated by PCR with random primersSivolap, I. M., Kalendar', R. N. & Chebotar', S. V., Nov 1994, In: Tsitologiia i genetika. 28, 6, p. 54-61 8 p.

Research output: Contribution to journal › Article › peer-review

13 Citations (Scopus)

Laboratory of bioinformatics and systems biology

Research output

Search results