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Research Output

  • 1359 Citations
  • 19 h-Index
  • 49 Article
  • 8 Letter
  • 7 Comment/debate
  • 4 Review article
2020

Application of an integrated cheminformatics-molecular docking approach for discovery for physicochemically similar analogs of fluoroquinolones as putative HCV inhibitors

Anwar, M. F., Khalid, R., Hasanain, A., Naeem, S., Zarina, S., Abidi, S. H. & Ali, S., Feb 2020, In : Computational Biology and Chemistry. 84, 107167.

Research output: Contribution to journalArticle

Open Access

Emergence of HIV-1 Unique DG Recombinant Form in Pakistan

Tariq, U., Mahmood, F., Naeem, S., Ali, S. & Abidi, S. H., Mar 2020, In : AIDS Research and Human Retroviruses. 36, 3, p. 248-250 3 p.

Research output: Contribution to journalArticle

1 Citation (Scopus)

Integrated Cheminformatics-Molecular Docking Approach to Drug Discovery Against Viruses

Anwar, M. F., Khalid, R., Hasanain, A., Naeem, S., Zarina, S., Abidi, S. H. & Ali, S., Jan 1 2020, In : Infectious disorders drug targets. 20, 2, p. 150-159 10 p.

Research output: Contribution to journalArticle

The emergence of an unassigned complex recombinant form in a Pakistani HIV-infected individual

Tariq, U., Iftikhar, A., Zahid, D., Sultan, F., Mahmood, S. F., Naeem, S., Ali, S. & Abidi, S. H., Apr 1 2020, In : Archives of Virology. 165, 4, p. 967-972 6 p.

Research output: Contribution to journalArticle

Transmission of HIV and HCV within Former Soviet Union Countries.

Zhangwen Ge, Yi, F., Shao, Y., DeHovitz, J., Vermund, S. & Ali, S., 2020, In : Canadian Journal of Gastroenterology and Hepatology. ID 9701920.

Research output: Contribution to journalArticle

2019

Healthcare malpractice and continuing HIV outbreaks in Pakistan

Davlidova, S., Abidi, S. H. & Ali, S., Nov 1 2019, In : BMJ Global Health. 4, 6, e001920.

Research output: Contribution to journalComment/debate

Open Access

Implementation of antiretroviral therapy (ART) in former Soviet Union countries

Amangaldiyeva, A., Davlidova, S., Baiserkin, B., Dzissyuk, N., Dehovitz, J. & Ali, S., Nov 19 2019, In : AIDS Research and Therapy. 16, 1, 35.

Research output: Contribution to journalReview article

Open Access
2018

Emergence of Circulating Recombinant Form 56-cpx in Pakistan

Tariq, U., Parveen, A., Akhtar, F., Mahmood, F., Ali, S. & Abidi, S. H., Nov 1 2018, In : AIDS Research and Human Retroviruses. 34, 11, p. 1002-1004 3 p.

Research output: Contribution to journalArticle

3 Citations (Scopus)

Evolution of HBV S-gene in the backdrop of HDV co-infection

Baig, S., Abidi, S. H., Azam, Z., Majid, S., Khan, S., Khanani, M. R. & Ali, S., Aug 1 2018, In : Journal of Medical Virology. 90, 8, p. 1328-1336 9 p.

Research output: Contribution to journalArticle

3 Citations (Scopus)

Molecular epidemiology of HIV-1 subtype A in former Soviet Union countries

Aibekova, L., Foley, B., Hortelano, G., Raees, M., Abdraimov, S., Toichuev, R. & Ali, S., Feb 2018, In : PLoS ONE. 13, 2, e0191891.

Research output: Contribution to journalArticle

5 Citations (Scopus)

Two for one: Viral helicases as an ideal target for HIV and HCV co-infection

Anwar, M. F., Zarina, S., Ali, S. & Abidi, S. H., Jul 1 2018, In : Medical Hypotheses. 116, p. 139-140 2 p.

Research output: Contribution to journalLetter

1 Citation (Scopus)
2017

Application of molecular genotyping to determine prevalence of HPV strains in Pap smears of Kazakhstan women

Niyazmetova, L., Aimagambetova, G., Stambekova, N., Abugalieva, Z., Seksembayeva, K., Ali, S. & Azizan, A., Jan 1 2017, In : International Journal of Infectious Diseases. 54, p. 85-88 4 p.

Research output: Contribution to journalArticle

6 Citations (Scopus)
15 Citations (Scopus)

Opium trade and the spread of HIV in the Golden Crescent

Farooq, S. A., Rasooly, M. H., Abidi, S. H., Modjarrad, K. & Ali, S., Jul 21 2017, In : Harm Reduction Journal. 14, 1, 47.

Research output: Contribution to journalReview article

3 Citations (Scopus)
2016

A roadmap for offering MOOC from an LMIC institution

Abidi, S. H., Pasha, A., Moran, G. & Ali, S., Jul 20 2016, (Accepted/In press) In : Learning, Media and Technology. p. 1-6 6 p.

Research output: Contribution to journalArticle

3 Citations (Scopus)

Challenges of offering a MOOC from an LMIC

Pasha, A., Abidi, S. H. & Ali, S., 2016, In : International Review of Research in Open and Distance Learning. 17, 6, p. 221-228 8 p.

Research output: Contribution to journalArticle

Open Access
2 Citations (Scopus)

Prevalence of transmitted drug resistance mutations in HIV-1-infected drug-naive patients from Urban and Suburban Regions of Kenya

Onsongo, S., Abidi, S. H., Khamadi, S., Shah, R., Kageha, S., Ojwang, P., Ali, S. & Okinda, N., Mar 1 2016, In : AIDS Research and Human Retroviruses. 32, 3, p. 220-225 6 p.

Research output: Contribution to journalArticle

1 Citation (Scopus)
2015

How Pakistan's media spreads the message about reproductive and sexual health

Abidi, S. H., Raees, M. & Ali, S., Mar 16 2015, In : BMJ (Online). 350, h1309.

Research output: Contribution to journalComment/debate

2 Citations (Scopus)

Viral co-infections in high-risk communities of Pakistan

Shah, A. A., Abidi, S. H., Kalish, M. L., Vermund, S. H. & Ali, S., Apr 1 2015, In : The Lancet HIV. 2, 4, p. e124-e125

Research output: Contribution to journalComment/debate

1 Citation (Scopus)
2014

HIV-1 progression links with viral genetic variability and subtype, and patient's HLA type: Analysis of a Nairobi-Kenyan cohort

Abidi, S. H., Shahid, A., Lakhani, L. S., Shah, R., Okinda, N., Ojwang, P., Abbas, F., Rowland-Jones, S. & Ali, S., Feb 1 2014, In : Medical Microbiology and Immunology. 203, 1, p. 57-63 7 p.

Research output: Contribution to journalArticle

7 Citations (Scopus)

HIV-1 subtype A gag variability and epitope evolution

Abidi, S. H., Kalish, M. L., Abbas, F., Rowland-Jones, S. & Ali, S., Jun 3 2014, In : PLoS ONE. 9, 6, e93415.

Research output: Contribution to journalArticle

7 Citations (Scopus)
2013

HIV among women and children in Pakistan

Raees, M. A., Abidi, S. H., Ali, W., Khanani, M. R. & Ali, S., May 1 2013, In : Trends in Microbiology. 21, 5, p. 213-214 2 p.

Research output: Contribution to journalComment/debate

3 Citations (Scopus)

Pakistan's expanded programme on immunization: An overview in the context of polio eradication and strategies for improving coverage

Owais, A., Khowaja, A. R., Ali, S. A. & Zaidi, A. K. M., Jul 18 2013, In : Vaccine. 31, 33, p. 3313-3319 7 p.

Research output: Contribution to journalReview article

20 Citations (Scopus)

Pandemic influenza A(H1N1)pdm09: An unrecognized cause of mortality in children in pakistan

Ali, S. A., Aziz, F., Akhtar, N., Qureshi, S., Edwards, K. & Zaidi, A., Oct 1 2013, In : Scandinavian Journal of Infectious Diseases. 45, 10, p. 791-795 5 p.

Research output: Contribution to journalArticle

4 Citations (Scopus)

Population-specific evolution of HIV Gag epitopes in genetically diverged patients

Abidi, S. H., Shahid, A., Lakhani, L. S., Khanani, M. R., Ojwang, P., Okinda, N., Shah, R., Abbas, F., Rowland-Jones, S. & Ali, S., Jun 1 2013, In : Infection, Genetics and Evolution. 16, p. 78-86 9 p.

Research output: Contribution to journalArticle

6 Citations (Scopus)

Risk of hearing loss in children exposed to gentamicin for the treatment of sepsis in young infancy: A community based cohort study in Pakistan

Iftikhar, U., Ali, S. A., Tikmani, S. S., Azam, I., Saleem, S. & Zaidi, A. K., Oct 1 2013, In : Journal of the Pakistan Medical Association. 63, 10, p. 1226-1229 4 p.

Research output: Contribution to journalArticle

Use of the SYBR Green dye for measuring helicase activity

Siddiqui, S., Khan, I., Zarina, S. & Ali, S., Mar 5 2013, In : Enzyme and Microbial Technology. 52, 3, p. 196-198 3 p.

Research output: Contribution to journalArticle

1 Citation (Scopus)
2012

Burden of Communicable Disease among the Native and Repatriating Afghans

Abidi, S. H., Ali, F., Shah, F., Abbas, F. & Ali, S., Oct 2012, In : PLoS Pathogens. 8, 10, e1002926.

Research output: Contribution to journalArticle

3 Citations (Scopus)

Fluoroquinolones inhibit HCV by targeting its helicase

Khan, I. A., Siddiqui, S., Rehmani, S., Kazmi, S. U. & Ali, S. H., 2012, In : Antiviral Therapy. 17, 3, p. 467-476 10 p.

Research output: Contribution to journalArticle

12 Citations (Scopus)

Fluoroquinolones inhibit HCV by targeting its helicase (Antiviral Therapy (2012) 17, (595))

Khan, I. A., Siddiqui, S., Rehmani, S., Kazmi, S. U. & Ali, S. H., 2012, In : Antiviral Therapy. 17, 3, 1 p.

Research output: Contribution to journalComment/debate

Underweight and overweight men have greater exercise-induced dyspnoea than normal weight men

Subhan, M. M. F., Ali, S. A., Bokhari, S. S. I., Khan, M. N. & Ahmad, H. R., Nov 1 2012, In : Upsala Journal of Medical Sciences. 117, 4, p. 383-389 7 p.

Research output: Contribution to journalArticle

3 Citations (Scopus)
2011

Letter to the editor HIV-1 circulating recombinant form in Nepal

Shahid, A., Dixit, S. M., Gurbacharya, V. L., Karmacharya, D. & Ali, S., Aug 2011, In : Journal of Virology. 85, 16, 1 p.

Research output: Contribution to journalLetter

4 Citations (Scopus)

Patterns of HIV infection among native and refugee Afghans

Ansari, A. S., Khanani, M. R., Abidi, S. H., Shah, F., Shahid, A. & Ali, S. H., Jul 17 2011, In : AIDS. 25, 11, p. 1427-1430 4 p.

Research output: Contribution to journalArticle

9 Citations (Scopus)

Real-world comparison of two molecular methods for detection of respiratory viruses

Ali, S., Gern, J. E., Hartert, T. V., Edwards, K. M., Griffin, M. R., Miller, E. K., Gebretsadik, T., Pappas, T., Lee, W. M. & Williams, J. V., Jul 1 2011, In : Virology Journal. 8, 332.

Research output: Contribution to journalArticle

26 Citations (Scopus)

Safe blood transfusion practices in blood banks of Karachi, Pakistan

Kassi, M., Afghan, A. K., Khanani, M. R., Khan, I. A. & Ali, S. H., Feb 1 2011, In : Transfusion Medicine. 21, 1, p. 57-62 6 p.

Research output: Contribution to journalArticle

12 Citations (Scopus)

The spread of HIV in Pakistan: Bridging of the epidemic between populations

Khanani, M. R., Somani, M., Rehmani, S. S., Veras, N. M. C., Salemi, M. & Ali, S. H., 2011, In : PLoS ONE. 6, 7, e22449.

Research output: Contribution to journalArticle

19 Citations (Scopus)
2010

A case of pseudohyperkalemia in a patient presenting with leucocytosis and high potassium level: A case report

Kim, A., Biteman, B., Malik, U. F., Siddique, S., Martin, M. R., Ali, S. A., Maboud, N., Raja, S., Zachry, A. & Mahmoud, A., Feb 1 2010, In : Cases Journal. 3, 2, 73.

Research output: Contribution to journalArticle

9 Citations (Scopus)

Concentrated epidemics of HIV, HCV, and HBV among Afghan refugees

Khanani, M. R., Ansari, A. S., Khan, S., Somani, M., Kazmi, S. U. & Ali, S. H., Nov 1 2010, In : Journal of Infection. 61, 5, p. 434-437 4 p.

Research output: Contribution to journalLetter

16 Citations (Scopus)

Evidence for a "Founder Effect" among HIV-infected injection drug users (IDUs) in Pakistan

Rai, M. A., Nerurkar, V. R., Khoja, S., Khan, S., Yanagihara, R., Rehman, A., Kazmi, S. U. & Ali, S. H., Jan 12 2010, In : BMC Infectious Diseases. 10, 7.

Research output: Contribution to journalArticle

12 Citations (Scopus)

Human metapneumovirus in hospitalized children in Amman, Jordan

Ali, S. A., Williams, J. V., Chen, Q., Faori, S., Shehabi, A., Al Jundi, E., Khuri-Bulos, N. & Halasa, N., May 1 2010, In : Journal of Medical Virology. 82, 6, p. 1012-1016 5 p.

Research output: Contribution to journalArticle

27 Citations (Scopus)

Prevalence of single, double, and triple infections of HIV, HCV and HBV among the MSM community in Pakistan

Khanani, M. R., Somani, M., Khan, S., Naseeb, S. & Ali, S. H., Dec 1 2010, In : Journal of Infection. 61, 6, p. 507-509 3 p.

Research output: Contribution to journalLetter

15 Citations (Scopus)
2009

Communicable disease among displaced Afghans: Refuge without shelter

Rajabali, A., Moin, O., Ansari, A. S., Khanani, M. R. & Ali, S. H., Jul 31 2009, In : Nature Reviews Microbiology. 7, 8, p. 609-614 6 p.

Research output: Contribution to journalArticle

23 Citations (Scopus)

Educating the power: HIV/AIDS and parliamentarians of Pakistan

Rai, M. A., Rajabali, A., Khan, M. N., Khan, M. A. & Ali, S. H., Sep 16 2009, In : Health Research Policy and Systems. 7, 1 p., 1478.

Research output: Contribution to journalComment/debate

2 Citations (Scopus)

Hepatitis B and hepatitis C in Pakistan: prevalence and risk factors

Ali, S. A., Donahue, R. M. J., Qureshi, H. & Vermund, S. H., Jan 1 2009, In : International Journal of Infectious Diseases. 13, 1, p. 9-19 11 p.

Research output: Contribution to journalReview article

199 Citations (Scopus)

HIV and homosexuality in Pakistan - Authors' reply

Rajabali, A. & Ali, S. H., Apr 1 2009, In : The Lancet Infectious Diseases. 9, 4, p. 205-206 2 p.

Research output: Contribution to journalLetter

Modulations of cell cycle checkpoints during HCV associated disease

Sarfraz, S., Hamid, S., Ali, S., Jafri, W. & Siddiqui, A. A., Aug 10 2009, In : BMC Infectious Diseases. 9, 1 p., 125.

Research output: Contribution to journalArticle

8 Citations (Scopus)
2008

Crimean-Congo hemorrhagic fever in Pakistan

Rai, M. A., Khanani, M. R., Warraich, H. J., Hayat, A. & Ali, S. H., Jun 1 2008, In : Journal of Medical Virology. 80, 6, p. 1004-1006 3 p.

Research output: Contribution to journalArticle

22 Citations (Scopus)

Genetic analysis of HIV-1 subtypes in Nairobi, Kenya

Khoja, S., Ojwang, P., Khan, S., Okinda, N., Harania, R. & Ali, S., Sep 11 2008, In : PLoS ONE. 3, 9, e3191.

Research output: Contribution to journalArticle

21 Citations (Scopus)

HIV and homosexuality in Pakistan

Rajabali, A., Khan, S., Warraich, H. J., Khanani, M. R. & Ali, S. H., Aug 2008, In : The Lancet Infectious Diseases. 8, 8, p. 511-515 5 p.

Research output: Contribution to journalComment/debate

31 Citations (Scopus)

Prevalence of HCV and HIV infections in 2005-earthquake-affected areas of Pakistan

Khan, S., Rai, M. A., Khan, A., Farooqui, A., Kazmi, S. U. & Ali, S. H., Oct 27 2008, In : BMC Infectious Diseases. 8, 147.

Research output: Contribution to journalArticle

13 Citations (Scopus)