Ulykbek Kairov, PhD

Head of Laboratory, Lead Researcher

Accepting PhD Students

PhD projects

1. Deconvolution of cancer multi-omics profiles (microarrays, RNA-seq, scRNA-seq, methylation) using Independent Component Analysis. 2. Identification and analysis of Kazakh specific genomic variants from whole-genome/exome datasets. 3. Comprehensive transcriptome profiling by NGS and analysis of patients with esophageal cancer from Kazakhstan.

  • 43 Citations
  • 4 h-Index
20122020

Research output per year

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Research Output

Transcriptional Programs Define Intratumoral Heterogeneity of Ewing Sarcoma at Single-Cell Resolution

Aynaud, M-M., Mirabeau, O., Gruel, N., Grossetête, S., Boeva, V., Durand, S., Surdez, D., Saulnier, O., Zaïdi, S., Gribkova, S., Fouché, A., Kairov, U., Raynal, V., Tirode, F., Grünewald, T. G. P., Bohec, M., Baulande, S., Janoueix-Lerosey, I., Vert, J-P., Barillot, E. & 2 others, Delattre, O. & Zinovyev, A., Feb 11 2020, In : Cell Reports. 30, 6, p. 1767-1779.e6

Research output: Contribution to journalArticle

  • Open Access

    Assessing reproducibility of matrix factorization methods in independent transcriptomes

    Cantini, L., Kairov, U., De Reyniès, A., Barillot, E., Radvanyi, F., Zinovyev, A. & Birol, I., Nov 1 2019, In : Bioinformatics. 35, 21, p. 4307-4313 7 p.

    Research output: Contribution to journalArticle

    Open Access
  • 5 Citations (Scopus)

    Independent Component Analysis for Unraveling the Complexity of Cancer Omics Datasets

    Sompairac, N., Nazarov, P. V., Czerwinska, U., Cantini, L., Biton, A., Molkenov, A., Zhumadilov, Z., Barillot, E., Radvanyi, F., Gorban, A., Kairov, U. & Zinovyev, A., Sep 7 2019, In : International Journal of Molecular Sciences. 20, 18

    Research output: Contribution to journalReview article

    Open Access
  • 3 Citations (Scopus)

    Application of independent component analysis to tumor transcriptomes reveals specific and reproducible immune-related signals

    Czerwinska, U., Cantini, L., Kairov, U., Barillot, E. & Zinovyev, A., Jan 1 2018, Latent Variable Analysis and Signal Separation - 14th International Conference, LVA/ICA 2018, Proceedings. Springer Verlag, p. 501-513 13 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 10891 LNCS).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  • 1 Citation (Scopus)