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• 2020

  Distribution of potentially toxic soil elements along a transect across Kazakhstan

  Guney, M., Yagofarova, A., Yapiyev, V., Schönbach, C., Kim, J. R. & Inglezakis, V. J., Jun 2020, In: Geoderma Regional. 21, e00281.

  Research output: Contribution to journal › Article › peer-review

  • soil toxicity
  • Kazakhstan
  • transect
  • soil
  • distribution
• 2019

  APBioNet's annual International Conference on Bioinformatics (InCoB) returns to India in 2018

  Ahmad, S., Gromiha, M. M., Raghava, G. P. S., Schönbach, C. & Ranganathan, S., Apr 18 2019, In: BMC Genomics. 19, 266.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  • Computational Biology
  • India
  • Congresses
  • Genomics
  • Big Data

• Encyclopedia of Bioinformatics and Computational Biology: ABC of Bioinformatics

  Ranganathan, S., Nakai, K. & Schönbach, C., Jan 1 2019, 1st ed. Elsevier. 3284 p.

  Research output: Book/Report › Scholarly edition

• Epitope predictions

  Kogay, R. & Schönbach, C., Jan 1 2019, Encyclopedia of Bioinformatics and Computational Biology: ABC of Bioinformatics. Ranganathan, S., Gribskov, M., Nakai, K. & Schönbach, C. (eds.). 1 ed. Elsevier, Vol. 2. p. 952 971 p.

  Research output: Chapter in Book/Report/Conference proceeding › Chapter (peer-reviewed) › peer-review

  • Epitopes
  • Peptides
  • Vaccines
  • Proteins
  • B-Lymphocyte Epitopes
• 2018

  A bioinformatics potpourri

  Schönbach, C., Li, J., Ma, L., Horton, P., Sjaugi, M. F. & Ranganathan, S., Jan 19 2018, In: BMC Genomics. 19, Suppl 1, p. 920

  Research output: Contribution to journal › Article › peer-review

  • Computational Biology
  • Genomics
  • Big Data
  • Posters
  • Informatics

• Kazakhstan Soil Microbiome Scientific Data, Mendeley Data, v1

  Yapiev, V., Gilman, C. P., Kabdullayeva, T., Suleimenova, A., Shagadatova, A., Duisembay, A., Naizabekov, S., Mussurova, S., Sydykova, K., Raimkulov, I., Abdrakhmanova, A., Omarkulova, S., Kabimoldayev, I., Nurmukhambetov, D., Kudarova, A., Schönbach, C. & Inglezakis, V., May 5 2018

  Research output: Non-textual form › Data set/Database

  Open Access

  • soil
  • topsoil
  • total organic carbon
  • carbon
  • organic carbon

• Top soil physical and chemical properties in Kazakhstan across a north-south gradient

  Yapiyev, V., Gilman, C. P., Kabdullayeva, T., Suleimenova, A., Shagadatova, A., Duisembay, A., Naizabekov, S., Mussurova, S., Sydykova, K., Raimkulov, I., Kabimoldayev, I., Abdrakhmanova, A., Omarkulova, S., Nurmukhambetov, D., Kudarova, A., Malgazhdar, D., Schönbach, C. & Inglezakis, V., Nov 13 2018, In: Scientific data. 5, 1 p., 180242.

  Research output: Contribution to journal › Article › peer-review

  • Physical Properties
  • Physical property
  • Soil
  • Chemical properties
  • Kazakhstan
  1 Citation (Scopus)
• 2016

  2016 update on APBioNet's annual international conference on bioinformatics (InCoB)

  Schönbach, C., Verma, C., Wee, L. J. K., Bond, P. J. & Ranganathan, S., Dec 22 2016, In: BMC Genomics. 17, 1036.

  Research output: Contribution to journal › Editorial › peer-review

  Open Access

  • Congresses
  • Computational Biology
  • Genomics
  • Systems Biology
  • Manuscripts
  1 Citation (Scopus)

• Bioinformatics and systems biology research update from the 15th International Conference on Bioinformatics (InCoB2016)

  Schönbach, C., Verma, C., Bond, P. J. & Ranganathan, S., Dec 22 2016, In: BMC Bioinformatics. 17, Suppl 19, p. 524

  Research output: Contribution to journal › Article › peer-review

  • Systems Biology
  • Bioinformatics
  • Update
  • Computational Biology
  • Genomics
  2 Citations (Scopus)

• Effects of a Single Escape Mutation on T Cell and HIV-1 Co-adaptation

  Sun, X., Shi, Y., Akahoshi, T., Fujiwara, M., Gatanaga, H., Schönbach, C., Kuse, N., Appay, V., Gao, G. F., Oka, S. & Takiguchi, M., Jun 7 2016, In: Cell Reports. 15, 10, p. 2279-2291 13 p.

  Research output: Contribution to journal › Article › peer-review

  • T-cells
  • HIV-1
  • T-Lymphocytes
  • Viruses
  • Mutation
  9 Citations (Scopus)
• 2015

  GIW and InCoB are advancing bioinformatics in the Asia-Pacific

  Schönbach, C., Horton, P., Yiu, S. M., Tan, T. W. & Ranganathan, S., Dec 18 2015, In: BMC Bioinformatics. 16, 18, I1.

  Research output: Contribution to journal › Article › peer-review

  • Informatics
  • Bioinformatics
  • Genome
  • Computational Biology
  • Protein Structure

• GOBLET: The Global Organisation for Bioinformatics Learning, Education and Training

  Atwood, T. K., Bongcam-Rudloff, E., Brazas, M. E., Corpas, M., Gaudet, P., Lewitter, F., Mulder, N., Palagi, P. M., Schneider, M. V., van Gelder, C. W. G., Attwood, T. K., Banag, C., Blackford, S., Blatter, M. C., Bongcam-Rudloff, E., Brazas, M. D., Brooksbank, C., Budd, A., Charleston, M., Christoffels, A. & 44 others, Conesa, A., Corpas, M., Crowe, M., Davies, A., de Crecy-Lagard, V., De Las Rivas, J., Doyle, M., Edwards, R., Facchiano, A., Fernandes, P., Gaeta, B., Gaudet, P., Heger, A., Herringa, J., Hughes, D., Jimenez, R. C., Kille, P., Korpelainen, E., Kumuthini, J., Lewitter, F., MacLean, D., Martinez, S. A. R., McGrath, A., Michalopoulos, I., Mulder, N., Ouellette, B. F., Palagi, P. M., Pearson, W. R., Qi, W., Romano, P., Rother, K., Sansone, S. A., Schneider, M. V., Schönbach, C., Tastan-Bishop, O., Trelles, O., Twells, R., van Gelder, C. W. G., Via, A., Vriend, G., Warnow, T., Watson, M., Westervelt, N. & Zanzoni, A., Apr 1 2015, In: PLoS Computational Biology. 11, 4, e1004143.

  Research output: Contribution to journal › Article › peer-review

  • education and training
  • bioinformatics
  • Bioinformatics
  • Education
  • Training
  35 Citations (Scopus)

• Introduction to selected papers from GIW/InCoB 2015

  Horton, P., Schönbach, C., Ranganathan, S. & Yiu, S. M., Oct 1 2015, In: Journal of Bioinformatics and Computational Biology. 13, 5, 1502003.

  Research output: Contribution to journal › Editorial › peer-review
• 2014

  Computational and bioinformatics techniques for immunology

  Pappalardo, F., Brusic, V., Castiglione, F. & Schönbach, C., Dec 31 2014, In: BioMed Research International. 2014, 263189.

  Research output: Contribution to journal › Editorial › peer-review
  7 Citations (Scopus)

• InCoB2014: Systems Biology update from the Asia-Pacific

  Ranganathan, S., Tan, T. W. & Schönbach, C., Dec 8 2014, In: BMC Systems Biology. 8, 4, I1.

  Research output: Contribution to journal › Article › peer-review

  • Gene Regulatory Network
  • Network Analysis
  • Systems Biology
  • Computational Biology
  • Bioinformatics

• InCoB2014: Bioinformatics to tackle the data to knowledge challenge

  Ranganathan, S., Tan, T. W. & Schönbach, C., Dec 8 2014, In: BMC Bioinformatics. 15, 16, I1.

  Research output: Contribution to journal › Article › peer-review

  • Bioinformatics
  • Computational Biology
  • Knowledge
  • Informatics
  • Proteins

• InCoB2014: Mining biological data from genomics for transforming industry and health

  Schönbach, C., Tan, T. W. & Ranganathan, S., Dec 8 2014, In: BMC Genomics. 15, I1.

  Research output: Contribution to journal › Article › peer-review

  • Data Mining
  • Genomics
  • Computational Biology
  • Industry
  • Health
  1 Citation (Scopus)
• 2013

  APBioNet-Transforming Bioinformatics in the Asia-Pacific Region

  Khan, A. M., Tan, T. W., Schönbach, C. & Ranganathan, S., Oct 2013, In: PLoS Computational Biology. 9, 10, e1003317.

  Research output: Contribution to journal › Article › peer-review
  3 Citations (Scopus)

• BlockLogo: visualization of peptide and sequence motif conservation

  Olsen, L. R., Kudahl, U. J., Simon, C., Sun, J., Schönbach, C., Reinherz, E. L., Zhang, G. L. & Brusic, V., Dec 31 2013, In: Journal of Immunological Methods. 400-401, 1, p. 37-44 8 p.

  Research output: Contribution to journal › Article › peer-review

  • Sequence Alignment
  • Peptides
  • Position-Specific Scoring Matrices
  • B-Lymphocyte Epitopes
  • Amino Acid Motifs
  21 Citations (Scopus)

• Computational vaccinology and the ICoVax 2012 workshop

  He, Y., Cao, Z., De Groot, A. S., Brusic, V., Schönbach, C. & Petrovsky, N., Mar 8 2013, In: BMC Bioinformatics. 14, SUPPL4, I1.

  Research output: Contribution to journal › Article › peer-review

  • Vaccinology
  • Vaccines
  • Epitopes
  • Informatics
  • Vaccine
  7 Citations (Scopus)

• Computational vaccinology and the ICoVax 2012 workshop.

  He, Y., Cao, Z., De Groot, A. S., Brusic, V., Schönbach, C. & Petrovsky, N., 2013, In: BMC Bioinformatics. 14 Suppl 4

  Research output: Contribution to journal › Article › peer-review

  • Vaccinology
  • Vaccines
  • Epitopes
  • Informatics
  • Vaccine

• InCoB2013 introduces Systems Biology as a major conference theme

  Schönbach, C., Shen, B., Tan, T. W. & Ranganathan, S., Nov 4 2013, In: BMC Systems Biology. 7, SUPPL.3, S1.

  Research output: Contribution to journal › Article › peer-review

  • Systems Biology
  • Bioinformatics
  • Congresses
  • Computational Biology
  • Networking
  2 Citations (Scopus)

• Molecular docking analysis of 2009-H1N1 and 2004-H5N1 influenza virus HLA-B*4405-restricted HA epitope candidates: implications for TCR cross-recognition and vaccine development.

  Su, C. T. T., Schönbach, C. & Kwoh, C. K., 2013, In: Unknown Journal. 14 Suppl 2, p. S21

  Research output: Contribution to journal › Article › peer-review

  • Molecular Docking
  • Epitopes
  • Molecular Docking Simulation
  • H5N1 Subtype Influenza A Virus
  • Vaccines
  8 Citations (Scopus)

• Tysnd1 Deficiency in Mice Interferes with the Peroxisomal Localization of PTS2 Enzymes, Causing Lipid Metabolic Abnormalities and Male Infertility

  Mizuno, Y., Ninomiya, Y., Nakachi, Y., Iseki, M., Iwasa, H., Akita, M., Tsukui, T., Shimozawa, N., Ito, C., Toshimori, K., Nishimukai, M., Hara, H., Maeba, R., Okazaki, T., Alodaib, A. N. A., Amoudi, M. A., Jacob, M., Alkuraya, F. S., Horai, Y., Watanabe, M. & 7 others, Motegi, H., Wakana, S., Noda, T., Kurochkin, I. V., Mizuno, Y., Schönbach, C. & Okazaki, Y., Feb 2013, In: PLoS Genetics. 9, 2, e1003286.

  Research output: Contribution to journal › Article › peer-review

  • infertility
  • Male Infertility
  • male sterility
  • abnormality
  • Trypsin
  18 Citations (Scopus)
• 2012

  Advances in translational bioinformatics and population genomics in the Asia-Pacific.

  Ranganathan, S., Tongsima, S., Chan, J., Tan, T. W. & Schönbach, C., 2012, In: Unknown Journal. 13 Suppl 7

  Research output: Contribution to journal › Article › peer-review

  Open Access

  • Metagenomics
  • Computational Biology
  • Congresses
  • Precision Medicine
  • Thailand
  2 Citations (Scopus)

• InCoB2012 Conference: from biological data to knowledge to technological breakthroughs.

  Schönbach, C., Tongsima, S., Chan, J., Brusic, V., Tan, T. W. & Ranganathan, S., 2012, In: Unknown Journal. 13 Suppl 17, p. S1 S1.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  • Bioinformatics
  • Computational Biology
  • Knowledge
  • Immunology
  • Biotechnology
  1 Citation (Scopus)
• 2011

  InCoB celebrates its tenth anniversary as first joint conference with ISCB-Asia

  Schönbach, C., Tan, T. W., Kelso, J., Rost, B., Nathan, S. & Ranganathan, S., 2011.

  Research output: Contribution to conference › Paper › peer-review

  Open Access

  • Anniversaries and Special Events
  • Bioinformatics
  • Congresses
  • bioinformatics
  • Computational Biology
  3 Citations (Scopus)

• InCoB celebrates its tenth anniversary as first joint conference with ISCB-Asia.

  Schönbach, C., Tan, T. W., Kelso, J., Rost, B., Nathan, S. & Ranganathan, S., Nov 30 2011, In: BMC Genomics. 12 Suppl 3

  Research output: Contribution to journal › Article › peer-review

  • Anniversaries and Special Events
  • Congresses
  • Computational Biology
  • Joints
  • Latin America

• Towards big data science in the decade ahead from ten years of InCoB and the 1st ISCB-Asia Joint Conference

  Ranganathan, S., Schönbach, C., Kelso, J., Rost, B., Nathan, S. & Tan, T. W., Nov 30 2011, In: BMC Bioinformatics. 12, SUPPL. 13, S1.

  Research output: Contribution to journal › Editorial › peer-review

  • Data Science
  • Big Data
  • Computational Biology
  • Bioinformatics
  • Big data
  17 Citations (Scopus)

• Towards big data science in the decade ahead from ten years of InCoB and the 1st ISCB-Asia Joint Conference

  Ranganathan, S., Schönbach, C., Kelso, J., Rost, B., Nathan, S. & Tan, T. W., 2011, 10th International Conference on Bioinformatics - 1st ISCB Asia Joint Conference 2011, InCoB 2011/ISCB-Asia 2011: Bioinformatics - Proceedings from Asia Pacific Bioinformatics Network (APBioNet). SUPPL. 13 ed. Vol. 12. S1

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Data Science
  • Big Data
  • Bioinformatics
  • bioinformatics
  • Computational Biology