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A transient post-translational modification of active site cysteine alters binding properties of the parkinsonism protein DJ-1

  • Arman Mussakhmetov
  • , Igor A. Shumilin
  • , Raushan Nugmanova
  • , Ivan G. Shabalin
  • , Timur Baizhumanov
  • , Daulet Toibazar
  • , Bekbolat Khassenov
  • , Wladek Minor
  • , Darkhan Utepbergenov
  • National Center for Biotechnology
  • University of Virginia
  • Nazarbayev University

Research output: Contribution to journalArticlepeer-review

Abstract

Mutations in the human protein DJ-1 cause early onset of Parkinson's disease. A reactive cysteine residue (Cys 106 ) of DJ-1 is crucial for its protective function, although the underlying mechanisms are unclear. Here we show that a fraction of bacterially expressed polyhistidine-tagged human DJ-1 could not be eluted from a Ni-nitrilotriacetate (Ni-NTA) column with 150 mM imidazole. This unusually tight binding was accompanied by the appearance of blue violet color on the Ni-NTA column. We demonstrate by X-ray crystallography that Cys 106 is carboxymethylated in a fraction of DJ-1 tightly bound to Ni-NTA and that the replacement of Cys 106 by serine abrogates the tight binding and the appearance of blue violet color. However, carboxymethylation of purified DJ-1 is insufficient to confer the tight binding to Ni-NTA. Moreover, when eluted protein was re-applied to the Ni-NTA column, no tight binding was observed, indicating that the formation of high affinity complex with Ni-NTA depends on a transient modification of Cys 106 that transforms into a Cys 106 -carboxymethyl adduct upon elution from Ni-NTA. We conclude that an unknown metabolite reacts with Cys 106 of DJ-1 to result in a transient post-translational modification. This modification is distinct from simple oxidation to sulfinic or sulfenic acids and confers altered binding properties to DJ-1 suggesting that it could serve as a signal for sensing oxidant stress.

Original languageEnglish
Pages (from-to)328-333
Number of pages6
JournalBiochemical and Biophysical Research Communications
Volume504
Issue number1
DOIs
Publication statusPublished - Sept 26 2018

Funding

This work was supported by the Nazarbayev University Social Policy and ORAU research grants to D. Utepbergenov. We thank Barat S. Venkataramany for critically reading this manuscript and Proteomics and Mass-Spectrometry Laboratory of National Biotechnology Center, Astana, for the help with MS experiments. The diffraction data were collected using resources of the Advanced Photon Source, a U.S. Department of Energy Office of Science User Facility operated for the DOE Office of Science by Argonne National Laboratory under Contract No. DE-AC02-06CH11357. Use of the LS-CAT Sector 21 was supported by the Michigan Economic Development Corporation and the Michigan Technology Tri-Corridor (Grant 085P1000817). This work was supported by the Nazarbayev University Social Policy and ORAU research grants to D. Utepbergenov. We thank Barat S. Venkataramany for critically reading this manuscript and Proteomics and Mass-Spectrometry Laboratory of National Biotechnology Center, Astana, for the help with MS experiments. The diffraction data were collected using resources of the Advanced Photon Source, a U.S. Department of Energy Office of Science User Facility operated for the DOE Office of Science by Argonne National Laboratory under Contract No. DE-AC02-06CH11357 . Use of the LS-CAT Sector 21 was supported by the Michigan Economic Development Corporation and the Michigan Technology Tri-Corridor (Grant 085P1000817 ).

UN SDGs

This output contributes to the following UN Sustainable Development Goals (SDGs)

  1. SDG 3 - Good Health and Well-being
    SDG 3 Good Health and Well-being

Keywords

  • DJ-1
  • Oxidative stress
  • PARK7
  • Parkinson's disease
  • S-carboxymethylcysteine

ASJC Scopus subject areas

  • Biophysics
  • Biochemistry
  • Molecular Biology
  • Cell Biology

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