Abstract
Biological/bioinformatics databases are essential for medical and biological studies. They integrate and organize biologically related information in a structured format and provide researchers with easy access to a variety of relevant data. This review presents an overview of publicly available databases relevant to proteomics studies in cancer research. They include gene/protein expression databases, gene mutation and single nucleotide polymorphisms databases, tumor antigen databases, protein-protein interaction, and biological pathway databases. Automated information retrieval from these databases enables efficient large-scale proteomics data analysis.
| Original language | English |
|---|---|
| Pages (from-to) | 349-364 |
| Number of pages | 16 |
| Journal | Methods in molecular biology (Clifton, N.J.) |
| Volume | 723 |
| DOIs | |
| Publication status | Published - 2011 |
| Externally published | Yes |
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ASJC Scopus subject areas
- Medicine(all)
Cite this
Database resources for proteomics-based analysis of cancer. / Zhang, Guang Lan; DeLuca, David S.; Brusic, Vladimir.
In: Methods in molecular biology (Clifton, N.J.), Vol. 723, 2011, p. 349-364.Research output: Contribution to journal › Article
}
TY - JOUR
T1 - Database resources for proteomics-based analysis of cancer.
AU - Zhang, Guang Lan
AU - DeLuca, David S.
AU - Brusic, Vladimir
PY - 2011
Y1 - 2011
N2 - Biological/bioinformatics databases are essential for medical and biological studies. They integrate and organize biologically related information in a structured format and provide researchers with easy access to a variety of relevant data. This review presents an overview of publicly available databases relevant to proteomics studies in cancer research. They include gene/protein expression databases, gene mutation and single nucleotide polymorphisms databases, tumor antigen databases, protein-protein interaction, and biological pathway databases. Automated information retrieval from these databases enables efficient large-scale proteomics data analysis.
AB - Biological/bioinformatics databases are essential for medical and biological studies. They integrate and organize biologically related information in a structured format and provide researchers with easy access to a variety of relevant data. This review presents an overview of publicly available databases relevant to proteomics studies in cancer research. They include gene/protein expression databases, gene mutation and single nucleotide polymorphisms databases, tumor antigen databases, protein-protein interaction, and biological pathway databases. Automated information retrieval from these databases enables efficient large-scale proteomics data analysis.
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UR - http://www.scopus.com/inward/citedby.url?scp=79958290934&partnerID=8YFLogxK
U2 - 10.1007/978-1-61779-043-0_22
DO - 10.1007/978-1-61779-043-0_22
M3 - Article
C2 - 21370076
AN - SCOPUS:79958290934
VL - 723
SP - 349
EP - 364
JO - Methods in molecular biology (Clifton, N.J.)
JF - Methods in molecular biology (Clifton, N.J.)
SN - 1064-3745
ER -