Detection of genetic relationships among spring and winter triticale (× Triticosecale witt.) and rye cultivars (Secale cereale L.) by using retrotransposon-based markers

Andrej Trebichalský; Ruslan Kalendar; Alan Schulman; Olga Stratula; Zdenka Gálová; Želmíra Balážova; Milan Chňapek

doi:10.17221/56/2013-cjgpb

Detection of genetic relationships among spring and winter triticale (× Triticosecale witt.) and rye cultivars (Secale cereale L.) by using retrotransposon-based markers

Andrej Trebichalský, Ruslan Kalendar, Alan Schulman, Olga Stratula, Zdenka Gálová, Želmíra Balážova, Milan Chňapek

Research output: Contribution to journal › Article › peer-review

10 Citations (Scopus)

Abstract

In the present research, we aimed to detect and evaluate the level of long terminal repeat (LTR) retrotransposons (WIS2, Wilma, Daniela, and Wham) intraspecific variability and intron polymorphism for β-amylase (BAMY) genes in 37 winter and 25 spring triticale cultivars coming from European countries and the USA and 5 Finnish rye cultivars. The triticale and rye genotypes differ significantly with respect to the patterns of the four explored LTR retrotransposons. A neighbour-joining dendrogram has separated all triticale and rye cultivars into three principal clusters: all winter triticale, all spring triticale and all rye cultivars. We have proved that retrotransposon-based markers can be used for differentiation of triticale and rye cultivars.

Original language	English
Pages (from-to)	171-174
Number of pages	4
Journal	Czech Journal of Genetics and Plant Breeding
Volume	49
Issue number	4
DOIs	https://doi.org/10.17221/56/2013-cjgpb
Publication status	Published - 2013
Externally published	Yes

Keywords

Genetic diversity
Long terminal repeat (LTR) genes
Molecular markers
Rye
Triticale
β-amylase (BAMY) genes

ASJC Scopus subject areas

Genetics
Plant Science

UN SDGs

This output contributes to the following UN Sustainable Development Goals (SDGs)

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10.17221/56/2013-cjgpb

Cite this

Trebichalský, A., Kalendar, R., Schulman, A., Stratula, O., Gálová, Z., Balážova, Ž., & Chňapek, M. (2013). Detection of genetic relationships among spring and winter triticale (× Triticosecale witt.) and rye cultivars (Secale cereale L.) by using retrotransposon-based markers. Czech Journal of Genetics and Plant Breeding, 49(4), 171-174. https://doi.org/10.17221/56/2013-cjgpb

Detection of genetic relationships among spring and winter triticale (× Triticosecale witt.) and rye cultivars (Secale cereale L.) by using retrotransposon-based markers. / Trebichalský, Andrej; Kalendar, Ruslan; Schulman, Alan et al.
In: Czech Journal of Genetics and Plant Breeding, Vol. 49, No. 4, 2013, p. 171-174.

Research output: Contribution to journal › Article › peer-review

Trebichalský, A, Kalendar, R, Schulman, A, Stratula, O, Gálová, Z, Balážova, Ž & Chňapek, M 2013, 'Detection of genetic relationships among spring and winter triticale (× Triticosecale witt.) and rye cultivars (Secale cereale L.) by using retrotransposon-based markers', Czech Journal of Genetics and Plant Breeding, vol. 49, no. 4, pp. 171-174. https://doi.org/10.17221/56/2013-cjgpb

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abstract = "In the present research, we aimed to detect and evaluate the level of long terminal repeat (LTR) retrotransposons (WIS2, Wilma, Daniela, and Wham) intraspecific variability and intron polymorphism for β-amylase (BAMY) genes in 37 winter and 25 spring triticale cultivars coming from European countries and the USA and 5 Finnish rye cultivars. The triticale and rye genotypes differ significantly with respect to the patterns of the four explored LTR retrotransposons. A neighbour-joining dendrogram has separated all triticale and rye cultivars into three principal clusters: all winter triticale, all spring triticale and all rye cultivars. We have proved that retrotransposon-based markers can be used for differentiation of triticale and rye cultivars.",

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AU - Trebichalský, Andrej

AU - Kalendar, Ruslan

AU - Schulman, Alan

AU - Stratula, Olga

AU - Gálová, Zdenka

AU - Balážova, Želmíra

AU - Chňapek, Milan

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AB - In the present research, we aimed to detect and evaluate the level of long terminal repeat (LTR) retrotransposons (WIS2, Wilma, Daniela, and Wham) intraspecific variability and intron polymorphism for β-amylase (BAMY) genes in 37 winter and 25 spring triticale cultivars coming from European countries and the USA and 5 Finnish rye cultivars. The triticale and rye genotypes differ significantly with respect to the patterns of the four explored LTR retrotransposons. A neighbour-joining dendrogram has separated all triticale and rye cultivars into three principal clusters: all winter triticale, all spring triticale and all rye cultivars. We have proved that retrotransposon-based markers can be used for differentiation of triticale and rye cultivars.

KW - Genetic diversity

KW - Long terminal repeat (LTR) genes

KW - Molecular markers

KW - Rye

KW - Triticale

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Detection of genetic relationships among spring and winter triticale (× Triticosecale witt.) and rye cultivars (Secale cereale L.) by using retrotransposon-based markers

Abstract

Keywords

ASJC Scopus subject areas

UN SDGs

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