Development of the Kazakhstan Y-chromosome haplotype reference database: analysis of 27 Y-STR in Kazakh population

Maxat Zhabagin, Aliya Sarkytbayeva, Inkar Tazhigulova, Dauren Yerezhepov, Svetlana Li, Rakhmetolla Akilzhanov, Alibek Yeralinov, Zhaxylyk Sabitov, Ainur Akilzhanova

Research output: Contribution to journalArticle

3 Citations (Scopus)

Abstract

To improve available databases of forensic interest, all Y-STR haplotypes from Kazakh population were presented in this study. The reference database accumulated almost 3650 samples from academic and citizen science. Additionally, 27 Y-STR from Yfiler Plus System were first analyzed in 300 males from Kazakh (Qazaq) populations residing in Kazakhstan. The data is available in the YHDR under accession numbers YA004316 and YA004322. A total of 270 unique haplotypes were observed. Discrimination capacity was 90%. Obtained Y-STR haplotypes exhibited a high intra-population diversity. Analysis of pairwise genetic distances showed lowest RST values from Uighur and Mongolian populations.

Original languageEnglish
Pages (from-to)1-4
Number of pages4
JournalInternational Journal of Legal Medicine
DOIs
Publication statusAccepted/In press - May 23 2018

Fingerprint

Kazakhstan
Y Chromosome
Haplotypes
Databases
Population

Keywords

  • Central Asia
  • Forensic
  • Kazakh
  • Population genetics
  • STR
  • Y chromosome
  • YHRD

ASJC Scopus subject areas

  • Pathology and Forensic Medicine

Cite this

Development of the Kazakhstan Y-chromosome haplotype reference database : analysis of 27 Y-STR in Kazakh population. / Zhabagin, Maxat; Sarkytbayeva, Aliya; Tazhigulova, Inkar; Yerezhepov, Dauren; Li, Svetlana; Akilzhanov, Rakhmetolla; Yeralinov, Alibek; Sabitov, Zhaxylyk; Akilzhanova, Ainur.

In: International Journal of Legal Medicine, 23.05.2018, p. 1-4.

Research output: Contribution to journalArticle

Zhabagin, Maxat ; Sarkytbayeva, Aliya ; Tazhigulova, Inkar ; Yerezhepov, Dauren ; Li, Svetlana ; Akilzhanov, Rakhmetolla ; Yeralinov, Alibek ; Sabitov, Zhaxylyk ; Akilzhanova, Ainur. / Development of the Kazakhstan Y-chromosome haplotype reference database : analysis of 27 Y-STR in Kazakh population. In: International Journal of Legal Medicine. 2018 ; pp. 1-4.
@article{ed0070c189534ee4b479496d315daa76,
title = "Development of the Kazakhstan Y-chromosome haplotype reference database: analysis of 27 Y-STR in Kazakh population",
abstract = "To improve available databases of forensic interest, all Y-STR haplotypes from Kazakh population were presented in this study. The reference database accumulated almost 3650 samples from academic and citizen science. Additionally, 27 Y-STR from Yfiler Plus System were first analyzed in 300 males from Kazakh (Qazaq) populations residing in Kazakhstan. The data is available in the YHDR under accession numbers YA004316 and YA004322. A total of 270 unique haplotypes were observed. Discrimination capacity was 90{\%}. Obtained Y-STR haplotypes exhibited a high intra-population diversity. Analysis of pairwise genetic distances showed lowest RST values from Uighur and Mongolian populations.",
keywords = "Central Asia, Forensic, Kazakh, Population genetics, STR, Y chromosome, YHRD",
author = "Maxat Zhabagin and Aliya Sarkytbayeva and Inkar Tazhigulova and Dauren Yerezhepov and Svetlana Li and Rakhmetolla Akilzhanov and Alibek Yeralinov and Zhaxylyk Sabitov and Ainur Akilzhanova",
year = "2018",
month = "5",
day = "23",
doi = "10.1007/s00414-018-1859-8",
language = "English",
pages = "1--4",
journal = "International Journal of Legal Medicine",
issn = "0937-9827",
publisher = "Springer Verlag",

}

TY - JOUR

T1 - Development of the Kazakhstan Y-chromosome haplotype reference database

T2 - analysis of 27 Y-STR in Kazakh population

AU - Zhabagin, Maxat

AU - Sarkytbayeva, Aliya

AU - Tazhigulova, Inkar

AU - Yerezhepov, Dauren

AU - Li, Svetlana

AU - Akilzhanov, Rakhmetolla

AU - Yeralinov, Alibek

AU - Sabitov, Zhaxylyk

AU - Akilzhanova, Ainur

PY - 2018/5/23

Y1 - 2018/5/23

N2 - To improve available databases of forensic interest, all Y-STR haplotypes from Kazakh population were presented in this study. The reference database accumulated almost 3650 samples from academic and citizen science. Additionally, 27 Y-STR from Yfiler Plus System were first analyzed in 300 males from Kazakh (Qazaq) populations residing in Kazakhstan. The data is available in the YHDR under accession numbers YA004316 and YA004322. A total of 270 unique haplotypes were observed. Discrimination capacity was 90%. Obtained Y-STR haplotypes exhibited a high intra-population diversity. Analysis of pairwise genetic distances showed lowest RST values from Uighur and Mongolian populations.

AB - To improve available databases of forensic interest, all Y-STR haplotypes from Kazakh population were presented in this study. The reference database accumulated almost 3650 samples from academic and citizen science. Additionally, 27 Y-STR from Yfiler Plus System were first analyzed in 300 males from Kazakh (Qazaq) populations residing in Kazakhstan. The data is available in the YHDR under accession numbers YA004316 and YA004322. A total of 270 unique haplotypes were observed. Discrimination capacity was 90%. Obtained Y-STR haplotypes exhibited a high intra-population diversity. Analysis of pairwise genetic distances showed lowest RST values from Uighur and Mongolian populations.

KW - Central Asia

KW - Forensic

KW - Kazakh

KW - Population genetics

KW - STR

KW - Y chromosome

KW - YHRD

UR - http://www.scopus.com/inward/record.url?scp=85047305093&partnerID=8YFLogxK

UR - http://www.scopus.com/inward/citedby.url?scp=85047305093&partnerID=8YFLogxK

U2 - 10.1007/s00414-018-1859-8

DO - 10.1007/s00414-018-1859-8

M3 - Article

AN - SCOPUS:85047305093

SP - 1

EP - 4

JO - International Journal of Legal Medicine

JF - International Journal of Legal Medicine

SN - 0937-9827

ER -