Optimizing FlowCam Imaging Flow Cytometry Operation for Classification and Quantification of Microcystis Morphospecies

Dmitry Malashenkov, Veronika Dashkova, Ivan A. Vorobjev, Natasha S. Barteneva

Research output: Chapter in Book/Report/Conference proceedingChapter

3 Citations (Scopus)

Abstract

Microcystis is a globally known cyanobacterium causing potentially toxic blooms worldwide. Different morphospecies with specific morphological and physiological characters usually co-occur during blooming, and their quantification employing light microscopy can be time-consuming and problematic. A benchtop imaging flow cytometer (IFC) FlowCam (Yokogawa Fluid Imaging Technologies, USA) was used to identify and quantitate different Microcystis morphospecies from environmental samples. We describe here the FlowCam methodology for sample processing and analysis of five European morphospecies of Microcystis common to the temperate zone. The FlowCam technique allows detection of different Microcystis morphospecies providing objective qualitative and quantitative data for statistical analysis.

Original languageEnglish
Title of host publicationMethods in Molecular Biology
PublisherHumana Press Inc.
Pages245-258
Number of pages14
DOIs
Publication statusPublished - 2023

Publication series

NameMethods in Molecular Biology
Volume2635
ISSN (Print)1064-3745
ISSN (Electronic)1940-6029

Keywords

  • Cyanobacteria
  • CyanoHABs
  • FlowCam
  • Imaging flow cytometry
  • Microcystis
  • Phytoplankton

ASJC Scopus subject areas

  • Molecular Biology
  • Genetics

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